Pseudomonas syringae pv. tomato DC3000, PSPTO_4115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_4115
NCBI Old Locus TagPSPTO4115
Name
Synonym: PSPTO4115
Replicon chromosome
Genomic location 4639663 - 4640127 (- strand)

Cross-References

RefSeq NP_793876.1
GI 28871257
Entrez 1185795
INSDC AAO57571.1
NCBI Locus Tag PSPTO_4115
NCBI Old Locus Tag PSPTO4115
UniParc UPI00000091CB
UniProtKB Acc Q87XR1
UniProtKB ID Q87XR1_PSESM
UniRef100 UniRef100_Q87XR1
UniRef50 UniRef50_Q5P6X1
UniRef90 UniRef90_Q87XR1

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein SlyB
Synonyms
Evidence for Translation
Charge (pH 7) 2.20
Kyte-Doolittle Hydrophobicity Value 0.086
Molecular Weight (kDa) 15.8
Isoelectric Point (pI) 9.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 82 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001015 (554 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4115
Search term: lipoprotein SlyB

Human Homologs

References

No references are associated with this feature.