Pseudomonas syringae pv. tomato DC3000, PSPTO_4117

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_4117
NCBI Old Locus TagPSPTO4117
Name
Synonym: PSPTO4117
Replicon chromosome
Genomic location 4641196 - 4642341 (- strand)

Cross-References

RefSeq NP_793878.1
GI 28871259
Entrez 1185797
INSDC AAO57573.1
NCBI Locus Tag PSPTO_4117
NCBI Old Locus Tag PSPTO4117
UniParc UPI00000091CD
UniProtKB Acc Q87XQ9
UniProtKB ID Q87XQ9_PSESM
UniRef100 UniRef100_Q87XQ9
UniRef50 UniRef50_Q4ZPN8
UniRef90 UniRef90_Q4ZPN8

Product

Feature Type CDS
Coding Frame 1
Product Name
ompA family protein
Synonyms
Evidence for Translation
Charge (pH 7) 13.42
Kyte-Doolittle Hydrophobicity Value -0.409
Molecular Weight (kDa) 39.6
Isoelectric Point (pI) 10.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 282 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001010 (548 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4117

Human Homologs

References

No references are associated with this feature.