Pseudomonas syringae pv. tomato DC3000, PSPTO_4132

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4132
NCBI Old Locus TagPSPTO4132
Name
Synonym: PSPTO4132
Replicon chromosome
Genomic location 4655885 - 4656538 (- strand)

Cross-References

RefSeq NP_793893.1
GI 28871274
Entrez 1185812
INSDC AAO57588.1
NCBI Locus Tag PSPTO_4132
NCBI Old Locus Tag PSPTO4132
UniParc UPI00000091DC
UniProtKB Acc Q87XP4
UniProtKB ID Q87XP4_PSESM
UniRef100 UniRef100_A0A038GGD0
UniRef50 UniRef50_W0MVP4
UniRef90 UniRef90_Q4ZPM3

Product

Feature Type CDS
Coding Frame 1
Product Name
repressor protein c2
Synonyms
Evidence for Translation
Charge (pH 7) -3.85
Kyte-Doolittle Hydrophobicity Value -0.271
Molecular Weight (kDa) 23.8
Isoelectric Point (pI) 4.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 79 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018579 (28 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4132

Human Homologs

References

No references are associated with this feature.