Pseudomonas syringae pv. tomato DC3000, PSPTO_4134

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4134
NCBI Old Locus Tag	PSPTO4134
Name	Synonym: PSPTO4134
Replicon	chromosome
Genomic location	4660133 - 4661179 (+ strand)

Cross-References

RefSeq	NP_793895.1
GI	28871276
Entrez	1185814
INSDC	AAO57590.1
NCBI Locus Tag	PSPTO_4134
NCBI Old Locus Tag	PSPTO4134
UniParc	UPI00000091DE
UniProtKB Acc	Q87XP2
UniProtKB ID	Q87XP2_PSESM
UniRef100	UniRef100_Q87XP2
UniRef50	UniRef50_S3N165
UniRef90	UniRef90_S3N165

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-6.96
Kyte-Doolittle Hydrophobicity Value	-0.354
Molecular Weight (kDa)	38.3
Isoelectric Point (pI)	6.05

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 134 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015268 (180 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4134

Human Homologs

References