Pseudomonas syringae pv. tomato DC3000, PSPTO_4139

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4139
NCBI Old Locus Tag	PSPTO4139
Name	Synonym: PSPTO4139
Replicon	chromosome
Genomic location	4665547 - 4666665 (+ strand)

Cross-References

RefSeq	NP_793900.1
GI	28871281
Entrez	1185819
INSDC	AAO57595.1
NCBI Locus Tag	PSPTO_4139
NCBI Old Locus Tag	PSPTO4139
UniParc	UPI00000091E3
UniProtKB Acc	Q87XN7
UniProtKB ID	Q87XN7_PSESM
UniRef100	UniRef100_Q87XN7
UniRef50	UniRef50_Q48LT0
UniRef90	UniRef90_Q48LT0

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-16.08
Kyte-Doolittle Hydrophobicity Value	0.046
Molecular Weight (kDa)	40.5
Isoelectric Point (pI)	4.76

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 53 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018581 (129 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4139

Human Homologs

References