Pseudomonas syringae pv. tomato DC3000, PSPTO_4146

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4146
NCBI Old Locus TagPSPTO4146
Name
Synonym: PSPTO4146
Replicon chromosome
Genomic location 4672629 - 4673723 (- strand)

Cross-References

RefSeq NP_793907.1
GI 28871288
Entrez 1185826
INSDC AAO57602.1
NCBI Locus Tag PSPTO_4146
NCBI Old Locus Tag PSPTO4146
UniParc UPI00000091EA
UniProtKB Acc Q87XN1
UniProtKB ID Q87XN1_PSESM
UniRef100 UniRef100_Q87XN1
UniRef50 UniRef50_A4G4Z1
UniRef90 UniRef90_Q87XN1

Product

Feature Type CDS
Coding Frame 1
Product Name
ParA family protein
Synonyms
Evidence for Translation
Charge (pH 7) -10.64
Kyte-Doolittle Hydrophobicity Value 0.156
Molecular Weight (kDa) 38.4
Isoelectric Point (pI) 4.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 646 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002161 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4146

Human Homologs

Ensembl 110, assembly GRCh38.p14
NUBP iron-sulfur cluster assembly factor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:20278]
E-value: 4.4e-66
Percent Identity: 45.4

References

No references are associated with this feature.