Pseudomonas syringae pv. tomato DC3000, PSPTO_4305

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_4305
NCBI Old Locus TagPSPTO4305
Name
Synonym: PSPTO4305
Replicon chromosome
Genomic location 4854807 - 4856267 (+ strand)

Cross-References

RefSeq NP_794061.1
GI 28871442
Entrez 1185986
INSDC AAO57756.1
NCBI Locus Tag PSPTO_4305
NCBI Old Locus Tag PSPTO4305
UniParc UPI000000927E
UniProtKB Acc Q87X83
UniProtKB ID Q87X83_PSESM
UniRef100 UniRef100_Q87X83
UniRef50 UniRef50_Q9WWZ8
UniRef90 UniRef90_S3NN29

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane efflux protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.30
Kyte-Doolittle Hydrophobicity Value -0.303
Molecular Weight (kDa) 53.3
Isoelectric Point (pI) 5.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 320 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000418 (551 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4305

Human Homologs

References

No references are associated with this feature.