Pseudomonas syringae pv. tomato DC3000, PSPTO_4306 (pcaT)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4306
NCBI Old Locus Tag	PSPTO4306
Name	pcaT Synonym: PSPTO4306
Replicon	chromosome
Genomic location	4856343 - 4857644 (- strand)

Cross-References

RefSeq	NP_794062.1
GI	28871443
Entrez	1185987
INSDC	AAO57757.1
NCBI Locus Tag	PSPTO_4306
NCBI Old Locus Tag	PSPTO4306
UniParc	UPI000000927F
UniProtKB Acc	Q87X82
UniProtKB ID	Q87X82_PSESM
UniRef100	UniRef100_Q87X82
UniRef50	UniRef50_P0AEX3
UniRef90	UniRef90_Q87X82

Product

Feature Type	CDS
Coding Frame	1
Product Name	dicarboxylic acid transport protein
Synonyms
Evidence for Translation
Charge (pH 7)	10.03
Kyte-Doolittle Hydrophobicity Value	0.501
Molecular Weight (kDa)	47.2
Isoelectric Point (pI)	9.36

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 316 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000228 (485 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4306 Search term: pcaT Search term: dicarboxylic acid transport protein

Human Homologs

References