Pseudomonas syringae pv. tomato DC3000, PSPTO_4410 (murD)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4410
NCBI Old Locus Tag	PSPTO4410
Name	murD Synonym: PSPTO4410
Replicon	chromosome
Genomic location	4977421 - 4978767 (- strand)

Cross-References

RefSeq	NP_794164.1
GI	28871545
Entrez	1186091
INSDC	AAO57859.1
NCBI Locus Tag	PSPTO_4410
NCBI Old Locus Tag	PSPTO4410
UniParc	UPI00000092E1
UniProtKB Acc	Q87WY3
UniProtKB ID	MURD_PSESM
UniRef100	UniRef100_Q87WY3
UniRef50	UniRef50_Q9HVZ9
UniRef90	UniRef90_Q87WY3

Product

Feature Type	CDS
Coding Frame	1
Product Name	UDP-N-acetylmuramoylalanine--D-glutamate ligase
Synonyms
Evidence for Translation
Charge (pH 7)	-6.27
Kyte-Doolittle Hydrophobicity Value	0.035
Molecular Weight (kDa)	48.0
Isoelectric Point (pI)	5.70

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 578 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004004 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4410 Search term: murD Search term: UDP-N-acetylmuramoylalanine--D-glutamate ligase

Human Homologs

References