Pseudomonas syringae pv. tomato DC3000, PSPTO_4610

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4610
NCBI Old Locus TagPSPTO4610
Name
Synonym: PSPTO4610
Replicon chromosome
Genomic location 5206026 - 5206406 (- strand)

Cross-References

RefSeq NP_794361.1
GI 28871742
Entrez 1186293
INSDC AAO58056.1
NCBI Locus Tag PSPTO_4610
NCBI Old Locus Tag PSPTO4610
UniParc UPI00000093A1
UniProtKB Acc Q87WE1
UniProtKB ID Q87WE1_PSESM
UniRef100 UniRef100_A0A038G5S6
UniRef50 UniRef50_B3E925
UniRef90 UniRef90_Q93TD7

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.37
Kyte-Doolittle Hydrophobicity Value -0.216
Molecular Weight (kDa) 13.4
Isoelectric Point (pI) 8.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 104 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004924 (476 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4610

Human Homologs

References

No references are associated with this feature.