Pseudomonas syringae pv. tomato DC3000, PSPTO_4997

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4997
NCBI Old Locus TagPSPTO4997
Name
Synonym: PSPTO4997
Replicon chromosome
Genomic location 5676226 - 5677671 (- strand)

Cross-References

RefSeq NP_794730.1
GI 28872111
Entrez 1186682
INSDC AAO58425.1
NCBI Locus Tag PSPTO_4997
NCBI Old Locus Tag PSPTO4997
UniParc UPI00000094FA
UniProtKB Acc Q87VE2
UniProtKB ID Q87VE2_PSESM
UniRef100 UniRef100_Q87VE2
UniRef50 UniRef50_G8Q3U0
UniRef90 UniRef90_D7HU64

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 7.60
Kyte-Doolittle Hydrophobicity Value -0.245
Molecular Weight (kDa) 54.1
Isoelectric Point (pI) 9.44

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 18 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004613 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4997

Human Homologs

References

No references are associated with this feature.