Pseudomonas syringae pv. tomato DC3000, PSPTO_4999

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_4999
NCBI Old Locus TagPSPTO4999
Name
Synonym: PSPTO4999
Replicon chromosome
Genomic location 5678460 - 5679194 (- strand)

Cross-References

RefSeq NP_794732.1
GI 28872113
Entrez 1186684
INSDC AAO58427.1
NCBI Locus Tag PSPTO_4999
NCBI Old Locus Tag PSPTO4999
UniParc UPI00000094FC
UniProtKB Acc Q87VE0
UniProtKB ID Q87VE0_PSESM
UniRef100 UniRef100_Q87VE0
UniRef50 UniRef50_D7HU66
UniRef90 UniRef90_D7HU66

Product

Feature Type CDS
Coding Frame 1
Product Name
lipopolysaccharide core biosynthesis protein
Synonyms
Evidence for Translation
Charge (pH 7) 16.13
Kyte-Doolittle Hydrophobicity Value -0.537
Molecular Weight (kDa) 28.6
Isoelectric Point (pI) 10.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 14 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004615 (550 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4999

Human Homologs

References

No references are associated with this feature.