Pseudomonas syringae pv. tomato DC3000, PSPTO_5013

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_5013
NCBI Old Locus TagPSPTO5013
Name
Synonym: PSPTO5013
Replicon chromosome
Genomic location 5698372 - 5698896 (- strand)

Cross-References

RefSeq NP_794746.1
GI 28872127
Entrez 1186698
INSDC AAO58441.1
NCBI Locus Tag PSPTO_5013
NCBI Old Locus Tag PSPTO5013
UniParc UPI000000950A
UniProtKB Acc Q87VC6
UniProtKB ID Q87VC6_PSESM
UniRef100 UniRef100_Q87VC6
UniRef50 UniRef50_A2SEL1
UniRef90 UniRef90_S3MA27

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 7.36
Kyte-Doolittle Hydrophobicity Value -0.395
Molecular Weight (kDa) 20.0
Isoelectric Point (pI) 9.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 93 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000544 (545 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_5013

Human Homologs

References

No references are associated with this feature.