Pseudomonas syringae pv. tomato DC3000, PSPTO_5023

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5023
NCBI Old Locus Tag	PSPTO5023
Name	Synonym: PSPTO5023
Replicon	chromosome
Genomic location	5717662 - 5719458 (+ strand)

Cross-References

RefSeq	NP_794756.3
GI	162533072
Entrez	1186708
INSDC	AAO58451.1
NCBI Locus Tag	PSPTO_5023
NCBI Old Locus Tag	PSPTO5023
UniParc	UPI00001C0412
UniProtKB Acc	Q87VB6
UniProtKB ID	NHAP2_PSESM
UniRef100	UniRef100_Q87VB6
UniRef50	UniRef50_Q87KV8
UniRef90	UniRef90_Q87VB6

Product

Feature Type	CDS
Coding Frame	1
Product Name	sodium/hydrogen exchanger family protein
Synonyms
Evidence for Translation
Charge (pH 7)	3.56
Kyte-Doolittle Hydrophobicity Value	0.801
Molecular Weight (kDa)	63.5
Isoelectric Point (pI)	8.13

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 363 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004628 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5023 Search term: sodium/hydrogen exchanger family protein

Human Homologs

References