Pseudomonas syringae pv. tomato DC3000, PSPTO_5062

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5062
NCBI Old Locus Tag	PSPTO5062
Name	Synonym: PSPTO5062
Replicon	chromosome
Genomic location	5765947 - 5766585 (+ strand)

Cross-References

RefSeq	NP_794794.1
GI	28872175
Entrez	1186747
INSDC	AAO58489.1
NCBI Locus Tag	PSPTO_5062
NCBI Old Locus Tag	PSPTO5062
UniParc	UPI000000953A
UniProtKB Acc	Q87V78
UniProtKB ID	Q87V78_PSESM
UniRef100	UniRef100_Q87V78
UniRef50	UniRef50_Q48PB1
UniRef90	UniRef90_Q48PB1

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative aldolase
Synonyms
Evidence for Translation
Charge (pH 7)	-3.89
Kyte-Doolittle Hydrophobicity Value	-0.094
Molecular Weight (kDa)	23.2
Isoelectric Point (pI)	5.66

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 415 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018867 (61 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5062 Search term: putative aldolase

Human Homologs

References