Pseudomonas syringae pv. tomato DC3000, PSPTO_5078
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest |
| Locus Tag |
PSPTO_5078
|
| NCBI Old Locus Tag | PSPTO5078 |
| Name |
Synonym: PSPTO5078 |
| Replicon | chromosome |
| Genomic location | 5783044 - 5783970 (+ strand) |
Cross-References
| RefSeq | NP_794810.1 |
| GI | 28872191 |
| Entrez | 1186763 |
| INSDC | AAO58505.1 |
| NCBI Locus Tag | PSPTO_5078 |
| NCBI Old Locus Tag | PSPTO5078 |
| UniParc | UPI0000009549 |
| UniProtKB Acc | Q87V63 |
| UniProtKB ID | Q87V63_PSESM |
| UniRef100 | UniRef100_Q87V63 |
| UniRef50 | UniRef50_Q4K4G4 |
| UniRef90 | UniRef90_Q48PC4 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
malonate utilization transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.16 |
| Kyte-Doolittle Hydrophobicity Value | 0.015 |
| Molecular Weight (kDa) | 34.7 |
| Isoelectric Point (pI) | 6.11 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 457 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000216 (492 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSPTO_5078
Search term: malonate utilization transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.