Pseudomonas syringae pv. tomato DC3000, PSPTO_5079 (madM)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5079
NCBI Old Locus Tag	PSPTO5079
Name	madM Synonym: PSPTO5079
Replicon	chromosome
Genomic location	5783981 - 5784745 (- strand)

Cross-References

RefSeq	NP_794811.1
GI	28872192
Entrez	1186764
INSDC	AAO58506.1
NCBI Locus Tag	PSPTO_5079
NCBI Old Locus Tag	PSPTO5079
UniParc	UPI000000954A
UniProtKB Acc	Q87V62
UniProtKB ID	Q87V62_PSESM
UniRef100	UniRef100_Q87V62
UniRef50	UniRef50_Q87V62
UniRef90	UniRef90_Q87V62

Product

Feature Type	CDS
Coding Frame	1
Product Name	malonate transporter subunit MadM
Synonyms
Evidence for Translation
Charge (pH 7)	4.67
Kyte-Doolittle Hydrophobicity Value	1.013
Molecular Weight (kDa)	26.0
Isoelectric Point (pI)	9.89

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 30 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000215 (475 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5079 Search term: madM Search term: malonate transporter subunit MadM

Human Homologs

References