Pseudomonas syringae pv. tomato DC3000, PSPTO_5119

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5119
NCBI Old Locus Tag	PSPTO5119
Name	Synonym: PSPTO5119
Replicon	chromosome
Genomic location	5820666 - 5823896 (- strand)

Cross-References

RefSeq	NP_794851.1
GI	28872232
Entrez	1186804
INSDC	AAO58546.1
NCBI Locus Tag	PSPTO_5119
NCBI Old Locus Tag	PSPTO5119
UniParc	UPI0000009572
UniProtKB Acc	Q87V22
UniProtKB ID	Q87V22_PSESM
UniRef100	UniRef100_Q87V22
UniRef50	UniRef50_Q87V22
UniRef90	UniRef90_Q87V22

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-34.36
Kyte-Doolittle Hydrophobicity Value	-0.313
Molecular Weight (kDa)	119.6
Isoelectric Point (pI)	4.75

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018898 (20 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5119

Human Homologs

References