Pseudomonas syringae pv. tomato DC3000, PSPTO_5432

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5432
NCBI Old Locus Tag	PSPTO5432
Name	Synonym: PSPTO5432
Replicon	chromosome
Genomic location	6176718 - 6178196 (- strand)

Cross-References

RefSeq	NP_795159.1
GI	28872540
Entrez	1187119
INSDC	AAO58854.1
NCBI Locus Tag	PSPTO_5432
NCBI Old Locus Tag	PSPTO5432
UniParc	UPI000000969B
UniProtKB Acc	Q87U76
UniProtKB ID	Q87U76_PSESM
UniRef100	UniRef100_Q87U76
UniRef50	UniRef50_G8Q745
UniRef90	UniRef90_G8Q745

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-10.15
Kyte-Doolittle Hydrophobicity Value	-0.466
Molecular Weight (kDa)	55.8
Isoelectric Point (pI)	5.52

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 111 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000083 (1225 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5432

Human Homologs

References