Pseudomonas syringae pv. tomato DC3000, PSPTO_5436

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_5436
NCBI Old Locus TagPSPTO5436
Name
Synonym: PSPTO5436
Replicon chromosome
Genomic location 6181756 - 6183798 (+ strand)

Cross-References

RefSeq NP_795163.1
GI 28872544
Entrez 1187123
INSDC AAO58858.1
NCBI Locus Tag PSPTO_5436
NCBI Old Locus Tag PSPTO5436
UniParc UPI000000969F
UniProtKB Acc Q87U72
UniProtKB ID Q87U72_PSESM
UniRef100 UniRef100_Q87U72
UniRef50 UniRef50_G8Q3S5
UniRef90 UniRef90_Q87U72

Product

Feature Type CDS
Coding Frame 1
Product Name
Rhs element Vgr protein
Synonyms
Evidence for Translation
Charge (pH 7) -15.74
Kyte-Doolittle Hydrophobicity Value -0.559
Molecular Weight (kDa) 75.8
Isoelectric Point (pI) 5.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 154 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000090 (3404 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_5436

Human Homologs

References

No references are associated with this feature.