Pseudomonas syringae pv. tomato DC3000, PSPTO_5469

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5469
NCBI Old Locus Tag	PSPTO5469
Name	Synonym: PSPTO5469
Replicon	chromosome
Genomic location	6230154 - 6232115 (+ strand)

Cross-References

RefSeq	NP_795193.1
GI	28872574
Entrez	1187161
INSDC	AAO58888.1
NCBI Locus Tag	PSPTO_5469
NCBI Old Locus Tag	PSPTO5469
UniParc	UPI00000096B9
UniProtKB Acc	Q87U46
UniProtKB ID	Q87U46_PSESM
UniRef100	UniRef100_Q87U46
UniRef50	UniRef50_Q9HTA6
UniRef90	UniRef90_Q87U46

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	0.70
Kyte-Doolittle Hydrophobicity Value	-0.413
Molecular Weight (kDa)	73.3
Isoelectric Point (pI)	7.13

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 18 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005008 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5469

Human Homologs

References