Pseudomonas syringae pv. tomato DC3000, PSPTO_5469
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest |
| Locus Tag |
PSPTO_5469
|
| NCBI Old Locus Tag | PSPTO5469 |
| Name |
Synonym: PSPTO5469 |
| Replicon | chromosome |
| Genomic location | 6230154 - 6232115 (+ strand) |
Cross-References
| RefSeq | NP_795193.1 |
| GI | 28872574 |
| Entrez | 1187161 |
| INSDC | AAO58888.1 |
| NCBI Locus Tag | PSPTO_5469 |
| NCBI Old Locus Tag | PSPTO5469 |
| UniParc | UPI00000096B9 |
| UniProtKB Acc | Q87U46 |
| UniProtKB ID | Q87U46_PSESM |
| UniRef100 | UniRef100_Q87U46 |
| UniRef50 | UniRef50_Q9HTA6 |
| UniRef90 | UniRef90_Q87U46 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.70 |
| Kyte-Doolittle Hydrophobicity Value | -0.413 |
| Molecular Weight (kDa) | 73.3 |
| Isoelectric Point (pI) | 7.13 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 18 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG005008 (550 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSPTO_5469
|
Human Homologs
References
No references are associated with this feature.