Pseudomonas syringae pv. tomato DC3000, PSPTO_5476 (ubiA)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5476
NCBI Old Locus Tag	PSPTO5476
Name	ubiA Synonym: PSPTO5476
Replicon	chromosome
Genomic location	6235935 - 6236825 (+ strand)

Cross-References

RefSeq	NP_795200.1
GI	28872581
Entrez	1187168
INSDC	AAO58895.1
NCBI Locus Tag	PSPTO_5476
NCBI Old Locus Tag	PSPTO5476
UniParc	UPI00000096C0
UniProtKB Acc	Q87U39
UniProtKB ID	UBIA_PSESM
UniRef100	UniRef100_Q87U39
UniRef50	UniRef50_Q12S01
UniRef90	UniRef90_Q87U39

Product

Feature Type	CDS
Coding Frame	1
Product Name	4-hydroxybenzoate octaprenyltransferase
Synonyms
Evidence for Translation
Charge (pH 7)	5.55
Kyte-Doolittle Hydrophobicity Value	0.596
Molecular Weight (kDa)	32.9
Isoelectric Point (pI)	8.88

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 448 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004923 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5476 Search term: ubiA Search term: 4-hydroxybenzoate octaprenyltransferase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000495761 coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223] E-value: 3.1e-41 Percent Identity: 35.3
Ensembl 110, assembly GRCh38.p14	ENSP00000310873 coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223] E-value: 3.1e-41 Percent Identity: 35.3

References