Pseudomonas syringae pv. tomato DC3000, PSPTO_5516 (uvrD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_5516
NCBI Old Locus TagPSPTO5516
Name
uvrD
Synonym: PSPTO5516
Replicon chromosome
Genomic location 6282042 - 6284225 (+ strand)

Cross-References

RefSeq NP_795240.1
GI 28872621
Entrez 1187208
INSDC AAO58935.1
NCBI Locus Tag PSPTO_5516
NCBI Old Locus Tag PSPTO5516
UniParc UPI00000096E6
UniProtKB Acc Q87U01
UniProtKB ID Q87U01_PSESM
UniRef100 UniRef100_Q87U01
UniRef50 UniRef50_Q48BM1
UniRef90 UniRef90_Q48BM1

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA helicase II
Synonyms
Evidence for Translation
Charge (pH 7) -10.68
Kyte-Doolittle Hydrophobicity Value -0.271
Molecular Weight (kDa) 81.5
Isoelectric Point (pI) 6.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004994 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_5516
Search term: uvrD
Search term: DNA helicase II

Human Homologs

References

No references are associated with this feature.