Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0024

Gene Feature Overview

Strain	Pseudomonas savastanoi pv. phaseolicola 1448A GCF_000012205.1|latest
Locus Tag	PSPPH_0024
Name
Replicon	chromosome
Genomic location	29454 - 30011 (+ strand)

Cross-References

RefSeq	YP_272338.1
GI	71735048
Entrez	3557374
INSDC	AAZ34812.1
NCBI Locus Tag	PSPPH_0024
UniParc	UPI0000575029
UniProtKB Acc	Q48QH8
UniProtKB ID	TSAC_PSE14
UniRef100	UniRef100_Q48QH8
UniRef50	UniRef50_Q88B46
UniRef90	UniRef90_Q88B46

Product

Feature Type	CDS
Coding Frame	1
Product Name	SUA5/yciO/yrdC domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	0.65
Kyte-Doolittle Hydrophobicity Value	-0.096
Molecular Weight (kDa)	20.5
Isoelectric Point (pI)	7.52

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 635 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000022 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPPH_0024 Search term: SUA5/yciO/yrdC domain-containing protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000362135 yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905] E-value: 1.1e-07 Percent Identity: 27.2

References