Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0050
Name
Replicon chromosome
Genomic location 52202 - 52747 (- strand)

Cross-References

RefSeq YP_272362.1
GI 71733495
Entrez 3555780
INSDC AAZ33259.1
NCBI Locus Tag PSPPH_0050
UniParc UPI0000575040
UniProtKB Acc Q48QF4
UniProtKB ID Q48QF4_PSE14
UniRef100 UniRef100_Q48QF4
UniRef50 UniRef50_E0SIT1
UniRef90 UniRef90_Q48QF4

Product

Feature Type CDS
Coding Frame 1
Product Name
hexapeptide repeat-containing transferase
Synonyms
Evidence for Translation
Charge (pH 7) -2.36
Kyte-Doolittle Hydrophobicity Value 0.117
Molecular Weight (kDa) 19403.2
Isoelectric Point (pI) 6.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 499 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000065 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0050

Human Homologs

References

No references are associated with this feature.