Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0129 (clpB1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0129
Name
clpB1
Replicon chromosome
Genomic location 150906 - 153509 (- strand)

Cross-References

RefSeq YP_272439.1
GI 71736516
Entrez 3558896
NCBI Locus Tag PSPPH_0129

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent Clp protease ATP-binding subunit
Synonyms
Evidence for Translation
Charge (pH 7) -20.50
Kyte-Doolittle Hydrophobicity Value -0.253
Molecular Weight (kDa) 95265.7
Isoelectric Point (pI) 5.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 597 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000089 (1199 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0129
Search term: clpB1

Human Homologs

Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.7e-38
Percent Identity: 34.6
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.7e-38
Percent Identity: 34.6
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.7e-38
Percent Identity: 34.6
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.7e-38
Percent Identity: 34.6
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.7e-38
Percent Identity: 34.6

References

No references are associated with this feature.