Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0425

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0425
Name
Replicon chromosome
Genomic location 489220 - 490911 (- strand)

Cross-References

RefSeq YP_272728.1
GI 71735350
Entrez 3557688
INSDC AAZ35114.1
NCBI Locus Tag PSPPH_0425
UniParc UPI0000575196
UniProtKB Acc Q48PE1
UniProtKB ID Q48PE1_PSE14
UniRef100 UniRef100_Q48PE1
UniRef50 UniRef50_Q4KJG4
UniRef90 UniRef90_Q48PE1

Product

Feature Type CDS
Coding Frame 1
Product Name
AMP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.66
Kyte-Doolittle Hydrophobicity Value -0.120
Molecular Weight (kDa) 62396.9
Isoelectric Point (pI) 7.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 190 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018878 (171 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0425

Human Homologs

References

No references are associated with this feature.