Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0444

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0444
Name
Replicon chromosome
Genomic location 504475 - 505194 (- strand)

Cross-References

RefSeq YP_272747.1
GI 71737741
Entrez 3560161
INSDC AAZ37505.1
NCBI Locus Tag PSPPH_0444
UniParc UPI00005751A8
UniProtKB Acc Q48PC2
UniProtKB ID Q48PC2_PSE14
UniRef100 UniRef100_Q48PC2
UniRef50 UniRef50_S6AC35
UniRef90 UniRef90_Q87V65

Product

Feature Type CDS
Coding Frame 1
Product Name
16S ribosomal RNA methyltransferase RsmE
Synonyms
Evidence for Translation
Charge (pH 7) -5.68
Kyte-Doolittle Hydrophobicity Value -0.242
Molecular Weight (kDa) 26403.8
Isoelectric Point (pI) 5.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 538 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000410 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0444

Human Homologs

References

No references are associated with this feature.