Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0462

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0462
Name
Replicon chromosome
Genomic location 526040 - 527254 (- strand)

Cross-References

RefSeq YP_272765.1
GI 71735003
Entrez 3557329
INSDC AAZ34767.1
NCBI Locus Tag PSPPH_0462
UniParc UPI00005751B8
UniProtKB Acc Q48PA4
UniProtKB ID Q48PA4_PSE14
UniRef100 UniRef100_Q48PA4
UniRef50 UniRef50_D7HUB7
UniRef90 UniRef90_D7HUB7

Product

Feature Type CDS
Coding Frame 1
Product Name
coproporphyrinogen III oxidase
Synonyms
Evidence for Translation
Charge (pH 7) -8.96
Kyte-Doolittle Hydrophobicity Value -0.279
Molecular Weight (kDa) 45.1
Isoelectric Point (pI) 5.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 584 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000377 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0462

Human Homologs

Ensembl 110, assembly GRCh38.p14
radical S-adenosyl methionine domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25634]
E-value: 1.3e-47
Percent Identity: 32.2

References

No references are associated with this feature.