Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0504 (yccS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0504
Name
yccS
Replicon chromosome
Genomic location 583086 - 585284 (- strand)

Cross-References

RefSeq YP_272806.1
GI 71737287
Entrez 3559690
INSDC AAZ37051.1
NCBI Locus Tag PSPPH_0504
UniParc UPI00005751E1
UniProtKB Acc Q48P63
UniProtKB ID Q48P63_PSE14
UniRef100 UniRef100_Q48P63
UniRef50 UniRef50_G8Q2H5
UniRef90 UniRef90_Q48P63

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 11.97
Kyte-Doolittle Hydrophobicity Value 0.255
Molecular Weight (kDa) 81.2
Isoelectric Point (pI) 8.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 139 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000445 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0504
Search term: yccS

Human Homologs

References

No references are associated with this feature.