Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0538

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0538
Name
Replicon chromosome
Genomic location 632383 - 633129 (- strand)

Cross-References

RefSeq YP_272840.1
GI 71737244
Entrez 3559647
INSDC AAZ37008.1
NCBI Locus Tag PSPPH_0538
UniParc UPI0000575203
UniProtKB Acc Q48P29
UniProtKB ID Q48P29_PSE14
UniRef100 UniRef100_Q48P29
UniRef50 UniRef50_G8Q3W3
UniRef90 UniRef90_Q87VG3

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 1.31
Kyte-Doolittle Hydrophobicity Value -0.144
Molecular Weight (kDa) 27399.3
Isoelectric Point (pI) 7.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 30 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004587 (526 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0538
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.