Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0953 (gmd)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0953
Name
gmd
Replicon chromosome
Genomic location 1131805 - 1132836 (- strand)

Cross-References

RefSeq YP_273225.1
GI 71734555
EC Number 4.2.1.47
Entrez 3556869
INSDC AAZ34319.1
NCBI Locus Tag PSPPH_0953
UniParc UPI000057536C
UniProtKB Acc Q48MZ7
UniProtKB ID Q48MZ7_PSE14
UniRef100 UniRef100_Q48MZ7
UniRef50 UniRef50_Q48MZ7
UniRef90 UniRef90_Q48MZ7

Product

Feature Type CDS
Coding Frame 1
Product Name
GDP-mannose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -4.33
Kyte-Doolittle Hydrophobicity Value -0.187
Molecular Weight (kDa) 38.6
Isoelectric Point (pI) 5.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 614 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004999 (381 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0953
Search term: gmd

Human Homologs

Ensembl 110, assembly GRCh38.p14
GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369]
E-value: 1.4e-106
Percent Identity: 56.3

References

No references are associated with this feature.