Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1412

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1412
Name
Replicon chromosome
Genomic location 1637434 - 1638114 (- strand)

Cross-References

RefSeq YP_273668.1
GI 71734539
Entrez 3556851
INSDC AAZ34303.1
NCBI Locus Tag PSPPH_1412
UniParc UPI00005754F4
UniProtKB Acc Q48LQ4
UniProtKB ID Q48LQ4_PSE14
UniRef100 UniRef100_Q48LQ4
UniRef50 UniRef50_Q88NS0
UniRef90 UniRef90_Q87XR3

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 1.56
Kyte-Doolittle Hydrophobicity Value -0.356
Molecular Weight (kDa) 24.5
Isoelectric Point (pI) 7.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001026 (424 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1412
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.