Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1421
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest |
| Locus Tag |
PSPPH_1421
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1648219 - 1651065 (- strand) |
Cross-References
| RefSeq | YP_273677.1 |
| GI | 71736377 |
| Entrez | 3558751 |
| NCBI Locus Tag | PSPPH_1421 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent helicase HepA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -44.07 |
| Kyte-Doolittle Hydrophobicity Value | -0.286 |
| Molecular Weight (kDa) | 106724.6 |
| Isoelectric Point (pI) | 4.77 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 315 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002310 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSPPH_1421
Search term: ATP-dependent helicase HepA
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value:
3.4e-09
Percent Identity:
22.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value:
3.4e-09
Percent Identity:
22.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value:
3.4e-09
Percent Identity:
22.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value:
3.4e-09
Percent Identity:
22.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value:
3.4e-09
Percent Identity:
22.6
|
References
No references are associated with this feature.