Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1425

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1425
Name
Replicon chromosome
Genomic location 1653813 - 1654379 (- strand)

Cross-References

RefSeq YP_273681.1
GI 71735823
Entrez 3558178
INSDC AAZ35587.1
NCBI Locus Tag PSPPH_1425
UniParc UPI0000575501
UniProtKB Acc Q48LP1
UniProtKB ID Q48LP1_PSE14
UniRef100 UniRef100_Q48LP1
UniRef50 UniRef50_D7I4X1
UniRef90 UniRef90_D7I4X1

Product

Feature Type CDS
Coding Frame 1
Product Name
acyl dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -0.66
Kyte-Doolittle Hydrophobicity Value -0.163
Molecular Weight (kDa) 20749.7
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 268 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002315 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1425
Search term: acyl dehydratase

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxyacyl-thioester dehydratase type 2 [Source:HGNC Symbol;Acc:HGNC:53111]
E-value: 1.8e-15
Percent Identity: 29.1
Ensembl 110, assembly GRCh38.p14
hydroxyacyl-thioester dehydratase type 2 [Source:HGNC Symbol;Acc:HGNC:53111]
E-value: 1.8e-15
Percent Identity: 29.1
Ensembl 110, assembly GRCh38.p14
hydroxyacyl-thioester dehydratase type 2 [Source:HGNC Symbol;Acc:HGNC:53111]
E-value: 1.8e-15
Percent Identity: 29.1

References

No references are associated with this feature.