Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1426 (fadD1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest |
| Locus Tag |
PSPPH_1426
|
| Name |
fadD1
|
| Replicon | chromosome |
| Genomic location | 1654652 - 1656340 (+ strand) |
Cross-References
| RefSeq | YP_273682.1 |
| GI | 71736347 |
| EC Number | 6.2.1.3 |
| Entrez | 3558720 |
| NCBI Locus Tag | PSPPH_1426 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
long-chain-fatty-acid--CoA ligase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.36 |
| Kyte-Doolittle Hydrophobicity Value | -0.007 |
| Molecular Weight (kDa) | 61.7 |
| Isoelectric Point (pI) | 7.27 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 602 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002317 (1059 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSPPH_1426
Search term: fadD1
Search term: long-chain-fatty-acid--CoA ligase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
acyl-CoA synthetase long chain family member 6 [Source:HGNC Symbol;Acc:HGNC:16496]
E-value:
1.3e-24
Percent Identity:
28.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
acyl-CoA synthetase long chain family member 6 [Source:HGNC Symbol;Acc:HGNC:16496]
E-value:
1.3e-24
Percent Identity:
28.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
acyl-CoA synthetase long chain family member 6 [Source:HGNC Symbol;Acc:HGNC:16496]
E-value:
1.3e-24
Percent Identity:
28.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
acyl-CoA synthetase long chain family member 6 [Source:HGNC Symbol;Acc:HGNC:16496]
E-value:
1.3e-24
Percent Identity:
28.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
acyl-CoA synthetase long chain family member 6 [Source:HGNC Symbol;Acc:HGNC:16496]
E-value:
1.3e-24
Percent Identity:
28.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
acyl-CoA synthetase long chain family member 6 [Source:HGNC Symbol;Acc:HGNC:16496]
E-value:
1.3e-24
Percent Identity:
28.5
|
References
No references are associated with this feature.