Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1427 (fadD2)

Gene Feature Overview

Strain	Pseudomonas savastanoi pv. phaseolicola 1448A GCF_000012205.1|latest
Locus Tag	PSPPH_1427
Name	fadD2
Replicon	chromosome
Genomic location	1656695 - 1658386 (+ strand)

Cross-References

RefSeq	YP_273683.1
GI	71735053
EC Number	6.2.1.3
Entrez	3557379
INSDC	AAZ34817.1
NCBI Locus Tag	PSPPH_1427
UniParc	UPI0000575503
UniProtKB Acc	Q48LN9
UniProtKB ID	Q48LN9_PSE14
UniRef100	UniRef100_Q48LN9
UniRef50	UniRef50_P69452
UniRef90	UniRef90_Q48LN9

Product

Feature Type	CDS
Coding Frame	1
Product Name	long-chain-fatty-acid--CoA ligase
Synonyms
Evidence for Translation
Charge (pH 7)	4.08
Kyte-Doolittle Hydrophobicity Value	-0.015
Molecular Weight (kDa)	61.8
Isoelectric Point (pI)	7.88

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 601 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002317 (1059 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPPH_1427 Search term: fadD2 Search term: long-chain-fatty-acid--CoA ligase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000403647 acyl-CoA synthetase long chain family member 5 [Source:HGNC Symbol;Acc:HGNC:16526] E-value: 3.6e-30 Percent Identity: 26.8

References