Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1601

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1601
Name
Replicon chromosome
Genomic location 1861521 - 1862987 (- strand)

Cross-References

RefSeq YP_273847.1
GI 71733681
Entrez 3555971
INSDC AAZ33445.1
NCBI Locus Tag PSPPH_1601
UniParc UPI000057559F
UniProtKB Acc Q48L78
UniProtKB ID Q48L78_PSE14
UniRef100 UniRef100_Q48L78
UniRef50 UniRef50_Q48L78
UniRef90 UniRef90_Q48L78

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.29
Kyte-Doolittle Hydrophobicity Value -0.176
Molecular Weight (kDa) 52902.0
Isoelectric Point (pI) 5.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017170 (4 members)
Putative Inparalogs 1 predicted inparalogs
hypothetical protein (PSPPH_2924) 52.0% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1601

Human Homologs

References

No references are associated with this feature.