Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1647 (holB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1647
Name
holB
Replicon chromosome
Genomic location 1909062 - 1910048 (+ strand)

Cross-References

RefSeq YP_273890.1
GI 71734572
EC Number 2.7.7.7
Entrez 3556886
INSDC AAZ34336.1
NCBI Locus Tag PSPPH_1647
UniParc UPI00005755C7
UniProtKB Acc Q48L35
UniProtKB ID Q48L35_PSE14
UniRef100 UniRef100_Q48L35
UniRef50 UniRef50_P52024
UniRef90 UniRef90_Q48L35

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA polymerase III subunit delta'
Synonyms
Evidence for Translation
Charge (pH 7) -0.32
Kyte-Doolittle Hydrophobicity Value -0.035
Molecular Weight (kDa) 36.2
Isoelectric Point (pI) 6.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002621 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1647
Search term: holB

Human Homologs

References

No references are associated with this feature.