Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1682

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1682
Name
Replicon chromosome
Genomic location 1946422 - 1947537 (+ strand)

Cross-References

RefSeq YP_273922.1
GI 71734635
Entrez 3556952
INSDC AAZ34399.1
NCBI Locus Tag PSPPH_1682
UniParc UPI00005755E7
UniProtKB Acc Q48L03
UniProtKB ID Q48L03_PSE14
UniRef100 UniRef100_Q48L03
UniRef50 UniRef50_D7HXS5
UniRef90 UniRef90_D7HXS5

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.65
Kyte-Doolittle Hydrophobicity Value -0.135
Molecular Weight (kDa) 41.4
Isoelectric Point (pI) 5.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015627 (151 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1682

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
E-value: 1.2e-21
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
E-value: 1.2e-21
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
E-value: 1.2e-21
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
E-value: 1.2e-21
Percent Identity: 31.8

References

No references are associated with this feature.