Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2031 (tatD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2031
Name
tatD
Replicon chromosome
Genomic location 2384616 - 2385452 (- strand)

Cross-References

RefSeq YP_274252.1
GI 71737607
EC Number 3.1.21.-
Entrez 3560020
NCBI Locus Tag PSPPH_2031

Product

Feature Type CDS
Coding Frame 1
Product Name
deoxyribonuclease TatD
Synonyms
Evidence for Translation
Charge (pH 7) -8.05
Kyte-Doolittle Hydrophobicity Value -0.361
Molecular Weight (kDa) 31215.0
Isoelectric Point (pI) 5.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002703 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2031
Search term: tatD

Human Homologs

Ensembl 110, assembly GRCh38.p14
TatD DNase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28988]
E-value: 1.7e-17
Percent Identity: 31.5
Ensembl 110, assembly GRCh38.p14
TatD DNase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28988]
E-value: 1.7e-17
Percent Identity: 31.5

References

No references are associated with this feature.