Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2038

Gene Feature Overview

Strain	Pseudomonas savastanoi pv. phaseolicola 1448A GCF_000012205.1|latest
Locus Tag	PSPPH_2038
Name
Replicon	chromosome
Genomic location	2391836 - 2392519 (- strand)

Cross-References

RefSeq	YP_274257.1
GI	71737361
Entrez	3559765
INSDC	AAZ37125.1
NCBI Locus Tag	PSPPH_2038
UniParc	UPI0000575728
UniProtKB Acc	Q48K18
UniProtKB ID	Q48K18_PSE14
UniRef100	UniRef100_F3EK30
UniRef50	UniRef50_D7HYL9
UniRef90	UniRef90_D7HYL9

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-6.58
Kyte-Doolittle Hydrophobicity Value	-0.222
Molecular Weight (kDa)	24.8
Isoelectric Point (pI)	5.18

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002712 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPPH_2038 Search term: ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000396789 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 3.1e-17 Percent Identity: 30.3
Ensembl 110, assembly GRCh38.p14	ENSP00000411096 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 3.1e-17 Percent Identity: 30.3
Ensembl 110, assembly GRCh38.p14	ENSP00000442634 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 3.1e-17 Percent Identity: 30.3

References