Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2048 (cysB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2048
Name
cysB
Replicon chromosome
Genomic location 2400667 - 2401641 (+ strand)

Cross-References

RefSeq YP_274267.1
GI 71737901
Entrez 3560327
INSDC AAZ37665.1
NCBI Locus Tag PSPPH_2048
UniParc UPI0000575730
UniProtKB Acc Q48K08
UniProtKB ID Q48K08_PSE14
UniRef100 UniRef100_F3EK20
UniRef50 UniRef50_P06614
UniRef90 UniRef90_Q4K8S3

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator CysB
Synonyms
Evidence for Translation
Charge (pH 7) -2.47
Kyte-Doolittle Hydrophobicity Value -0.008
Molecular Weight (kDa) 36.3
Isoelectric Point (pI) 6.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5Z4Y DNA BINDING PROTEIN 01/18/18 Crystal structure of PaCysB NTD domain with space group P4 Pseudomonas aeruginosa 2.401 X-RAY DIFFRACTION 98.9
5Z4Z DNA BINDING PROTEIN 01/15/18 Crystal structure of PaCysB NTD domain with space group C2 Pseudomonas aeruginosa 2.053 X-RAY DIFFRACTION 98.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 534 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003639 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2048
Search term: cysB

Human Homologs

References

No references are associated with this feature.