Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2067

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2067
Name
Replicon chromosome
Genomic location 2422643 - 2423140 (+ strand)

Cross-References

RefSeq YP_274286.1
GI 71734312
Entrez 3556617
INSDC AAZ34076.1
NCBI Locus Tag PSPPH_2067
UniParc UPI0000008B2B
UniProtKB Acc Q48JY9
UniProtKB ID Q48JY9_PSE14
UniRef100 UniRef100_Q48JY9
UniRef50 UniRef50_A4VL64
UniRef90 UniRef90_A4VL64

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor SigX
Synonyms
Evidence for Translation
Charge (pH 7) 3.15
Kyte-Doolittle Hydrophobicity Value -0.618
Molecular Weight (kDa) 19.7
Isoelectric Point (pI) 8.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 470 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003619 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2067

Human Homologs

References

No references are associated with this feature.