Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2068

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2068
Name
Replicon chromosome
Genomic location 2423246 - 2424280 (+ strand)

Cross-References

RefSeq YP_274287.1
GI 71736714
Entrez 3559099
INSDC AAZ36478.1
NCBI Locus Tag PSPPH_2068
UniParc UPI0000575743
UniProtKB Acc Q48JY8
UniProtKB ID Q48JY8_PSE14
UniRef100 UniRef100_F3EK00
UniRef50 UniRef50_P13794
UniRef90 UniRef90_P22263

Product

Feature Type CDS
Coding Frame 1
Product Name
OprF
Synonyms
Evidence for Translation
Charge (pH 7) -14.39
Kyte-Doolittle Hydrophobicity Value -0.457
Molecular Weight (kDa) 36.6
Isoelectric Point (pI) 4.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 434 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003618 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2068
Search term: OprF

Human Homologs

References

No references are associated with this feature.