Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2108

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2108
Name
Replicon chromosome
Genomic location 2468571 - 2469461 (+ strand)

Cross-References

RefSeq YP_274327.1
GI 71737653
Entrez 3560070
INSDC AAZ37417.1
NCBI Locus Tag PSPPH_2108
UniParc UPI000057576B
UniProtKB Acc Q48JV0
UniProtKB ID Q48JV0_PSE14
UniRef100 UniRef100_Q48JV0
UniRef50 UniRef50_D8IXT2
UniRef90 UniRef90_D7HYY3

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA pseudouridine synthase
Synonyms
Evidence for Translation
Charge (pH 7) 0.07
Kyte-Doolittle Hydrophobicity Value -0.300
Molecular Weight (kDa) 33.7
Isoelectric Point (pI) 7.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 567 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003402 (543 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2108

Human Homologs

Ensembl 97, assembly GRCh38.p12
RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
E-value: 2.1e-14
Percent Identity: 29.6
Ensembl 97, assembly GRCh38.p12
RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
E-value: 2.1e-14
Percent Identity: 29.6

References

No references are associated with this feature.