Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2302

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2302
Name
Replicon chromosome
Genomic location 2668585 - 2669403 (+ strand)

Cross-References

RefSeq YP_274508.1
GI 71737632
Entrez 3560047
INSDC AAZ37396.1
NCBI Locus Tag PSPPH_2302
UniParc UPI0000575817
UniProtKB Acc Q48JC2
UniProtKB ID Q48JC2_PSE14
UniRef100 UniRef100_Q48JC2
UniRef50 UniRef50_D5BNX1
UniRef90 UniRef90_Q48JC2

Product

Feature Type CDS
Coding Frame 1
Product Name
phytanoyl-CoA dioxygenase
Synonyms
Evidence for Translation
Charge (pH 7) -5.89
Kyte-Doolittle Hydrophobicity Value -0.602
Molecular Weight (kDa) 31.0
Isoelectric Point (pI) 5.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 66 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG021031 (25 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2302

Human Homologs

References

No references are associated with this feature.