Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2607

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2607
Name
Replicon chromosome
Genomic location 3005676 - 3007160 (- strand)

Cross-References

RefSeq YP_274801.1
GI 71734418
Entrez 3556725
INSDC AAZ34182.1
NCBI Locus Tag PSPPH_2607
UniParc UPI0000575934
UniProtKB Acc Q48II0
UniProtKB ID Q48II0_PSE14
UniRef100 UniRef100_Q48II0
UniRef50 UniRef50_C5CTV7
UniRef90 UniRef90_S3MFM0

Product

Feature Type CDS
Coding Frame 1
Product Name
circadian clock gene kaiC
Synonyms
Evidence for Translation
Charge (pH 7) -5.37
Kyte-Doolittle Hydrophobicity Value -0.077
Molecular Weight (kDa) 54.4
Isoelectric Point (pI) 6.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 240 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018005 (111 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2607

Human Homologs

References

No references are associated with this feature.