Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2921

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2921
Name
Replicon chromosome
Genomic location 3393048 - 3393956 (- strand)

Cross-References

RefSeq YP_275103.1
GI 71737118
Entrez 3559512
INSDC AAZ36882.1
NCBI Locus Tag PSPPH_2921
UniParc UPI0000575A5A
UniProtKB Acc Q48HN0
UniProtKB ID Q48HN0_PSE14
UniRef100 UniRef100_Q48HN0
UniRef50 UniRef50_Q48HN0
UniRef90 UniRef90_Q48HN0

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.55
Kyte-Doolittle Hydrophobicity Value -0.013
Molecular Weight (kDa) 33415.0
Isoelectric Point (pI) 6.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 519 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000232 (717 members)
Putative Inparalogs 1 predicted inparalogs
LysRfamily transcriptioanl regulator (PSPPH_A0062) 33.3% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2921

Human Homologs

References

No references are associated with this feature.