Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3274 (katB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3274
Name
katB
Replicon chromosome
Genomic location 3794630 - 3796162 (+ strand)

Cross-References

RefSeq YP_275434.1
GI 71734945
EC Number 1.11.1.6
Entrez 3557269
INSDC AAZ34709.1
NCBI Locus Tag PSPPH_3274
UniParc UPI0000575B9A
UniProtKB Acc Q48GP9
UniProtKB ID Q48GP9_PSE14
UniRef100 UniRef100_Q48GP9
UniRef50 UniRef50_Q59635
UniRef90 UniRef90_P46206

Product

Feature Type CDS
Coding Frame 1
Product Name
catalase KatB
Synonyms
Evidence for Translation
Charge (pH 7) -1.13
Kyte-Doolittle Hydrophobicity Value -0.523
Molecular Weight (kDa) 56725.4
Isoelectric Point (pI) 6.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1M7S OXIDOREDUCTASE 07/22/02 Crystal Structure Analysis of Catalase CatF of Pseudomonas syringae Pseudomonas syringae 1.8 X-RAY DIFFRACTION 97.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 319 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001474 (1465 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3274
Search term: katB
Search term: catalase KatB

Human Homologs

Ensembl 110, assembly GRCh38.p14
catalase [Source:HGNC Symbol;Acc:HGNC:1516]
E-value: 1.8e-102
Percent Identity: 42.1

References

No references are associated with this feature.